Sporosarcina newyorkensis 2681

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Sporosarcina

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusSporosarcina
SpeciesSporosarcina newyorkensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sporosarcina newyorkensis 2681

Accession NumberAFPZ00000000.1

Gene Summary

Adenine Count

1016399 bp

Thymine Count

1082304 bp

Guanine Count

703875 bp

Cytosine Count

824829 bp

Genome Length

3627407 bp

Protein-coding Genes

3755 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
TransposaseHMPREF9372_1236P31667-1184166 - 118517039049.1
AttlNot AvailableNot Available+1184208 - 1184219Not Available
hypothetical proteinHMPREF9372_1237Not Available-1185304 - 118606829732.5
Tyrosine-type recombinase/integraseHMPREF9372_1238Q5HPU0-1186087 - 118695333381.3
LysinHMPREF9372_1239Q2FG95-1187129 - 118780624817.9
HolinHMPREF9372_1240Q92FD1-1187803 - 118824616501.7
hypothetical proteinHMPREF9372_1241Not Available-1188288 - 118911232846.8
Endopeptidase tail proteinHMPREF9372_1242Not Available-1189173 - 119026741864.1
AttrNot AvailableNot Available+1189989 - 1190000Not Available
Hypothetical proteinHMPREF9372_1243Not Available-1190285 - 11904285182.45

Displaying genes 1 – 10 of 3901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

236 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0010887(4R,5S)-dethiobiotinC10H18N2O3Chemical structure of (4R,5S)-dethiobiotin533-48-2
Average214.2615Da
Monoisotopic214.1317425Da
BASm00113396-methyl-3,7-dioxodecanedioyl-CoAC32H45N7O21P3SChemical structure of 6-methyl-3,7-dioxodecanedioyl-CoANot available
Average988.72Da
Monoisotopic988.1629516Da
BASm00113404-methyl-5-oxo-octanedioyl-CoAC30H43N7O20P3SChemical structure of 4-methyl-5-oxo-octanedioyl-CoANot available
Average946.69Da
Monoisotopic946.1523869Da
BASm00116522-oxooctanoateC8H13O3Chemical structure of 2-oxooctanoateNot available
Average157.19Da
Monoisotopic157.087017859Da
BASm0011787(S)-2-hydroxymethylglutarateC6H8O5Chemical structure of (S)-2-hydroxymethylglutarateNot available
Average160.126Da
Monoisotopic160.038270517Da
BASm0012597(6R)-10-formyltetrahydrofolateC20H21N7O7Chemical structure of (6R)-10-formyltetrahydrofolateNot available
Average471.431Da
Monoisotopic471.151343204Da

Displaying 231–236 of 236 metabolites