Sporosarcina newyorkensis 2681

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Sporosarcina

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusSporosarcina
SpeciesSporosarcina newyorkensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sporosarcina newyorkensis 2681

Accession NumberAFPZ00000000.1

Gene Summary

Adenine Count

1016399 bp

Thymine Count

1082304 bp

Guanine Count

703875 bp

Cytosine Count

824829 bp

Genome Length

3627407 bp

Protein-coding Genes

3755 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
formyltetrahydrofolate deformylaseHMPREF9372_0539O34990-467133 - 46818240352.9
hypothetical proteinHMPREF9372_0540O05396-468410 - 46890417724.5
nad-dependent formate dehydrogenase, alpha subunitHMPREF9372_0541Q795Y4-468917 - 471883110621.0
yrhf like proteinHMPREF9372_0542O05398+472108 - 47244912880.7
formate dehydrogenase family accessory protein fdhdHMPREF9372_0543Q5WJL4+472465 - 47325929887.2
mfs family major facilitator transporter, oxalate:formate antiporterHMPREF9372_0544A0LNN5+473517 - 47480045856.7
neutral zinc metallopeptidaseHMPREF9372_0545P64431-474846 - 47568830822.2
phosphoserine transaminaseHMPREF9372_0546B1HSU6+475876 - 47700041351.2
hypothetical proteinHMPREF9372_0547O31856-477047 - 47789832115.5
hypothetical proteinHMPREF9372_0548Not Available-477960 - 47838516847.3

Displaying genes 661 – 670 of 3901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

236 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm00004573,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneC19H24O4Chemical structure of 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneNot available
Average316.3915Da
Monoisotopic316.1674593Da

Displaying 1–10 of 236 metabolites