Sporosarcina newyorkensis 2681

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Sporosarcina

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusSporosarcina
SpeciesSporosarcina newyorkensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sporosarcina newyorkensis 2681

Accession NumberAFPZ00000000.1

Gene Summary

Adenine Count

1016399 bp

Thymine Count

1082304 bp

Guanine Count

703875 bp

Cytosine Count

824829 bp

Genome Length

3627407 bp

Protein-coding Genes

3755 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna-directed dna polymerase iii beta subunitHMPREF9372_2681P05649+2581740 - 258287642468.4
rna-binding s4 proteinHMPREF9372_2682P05650+2582991 - 25832369082.83
recombination protein fHMPREF9372_2683B1HS35+2583226 - 258434442942.9
dna topoisomerase (atp-hydrolyzing) subunit bHMPREF9372_2684O50627+2584393 - 258631571582.8
dna topoisomerase (atp-hydrolyzing) subunit aHMPREF9372_2685P05653+2586389 - 258889993956.9
hypothetical proteinHMPREF9372_2686Q9WY30+2589040 - 259016142132.2
hypothetical proteinHMPREF9372_2687Not Available+2590464 - 25907179905.02
glutathione peroxidaseHMPREF9372_2688Q9CFV1+2590719 - 259123119690.6
inosine-5'-monophosphate dehydrogenaseHMPREF9372_2689P21879+2591337 - 259280352707.8
d-alanyl-d-alanine carboxypeptidase dacaHMPREF9372_2690Not Available+2593012 - 259432547881.4

Displaying genes 2771 – 2780 of 3901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

236 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm00004573,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneC19H24O4Chemical structure of 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneNot available
Average316.3915Da
Monoisotopic316.1674593Da

Displaying 1–10 of 236 metabolites