Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Hafnia alvei ATCC 51873
Accession NumberAGCI00000000.1
Gene Summary
Adenine Count
1265814 bp
Thymine Count
1262255 bp
Guanine Count
1172649 bp
Cytosine Count
1181591 bp
Genome Length
4882309 bp
Protein-coding Genes
4678 genes
Non-Coding Genes
337 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-serine deaminase transcriptional activator | HMPREF0454_00905 | Not Available | + | 888043 - 888990 | 36205.4 |
| mosc domain protein | HMPREF0454_00906 | Not Available | - | 888987 - 889658 | 25382.3 |
| superoxide dismutase | HMPREF0454_00907 | Not Available | - | 889786 - 890418 | 23532.7 |
| hypothetical protein | HMPREF0454_00908 | Not Available | - | 890735 - 890863 | 5022.52 |
| hypothetical protein | HMPREF0454_00909 | Not Available | + | 890988 - 891887 | 33102.5 |
| accessory protein fdhd, formate dehydrogenase family | HMPREF0454_00910 | Not Available | - | 892065 - 892904 | 30440.0 |
| tat pathway signal sequence domain protein | HMPREF0454_00911 | Not Available | + | 893165 - 893752 | 21453.6 |
| formate dehydrogenase, alpha subunit | HMPREF0454_00912 | Not Available | + | 893801 - 896215 | 89653.1 |
| formate dehydrogenase, beta subunit | HMPREF0454_00913 | Not Available | + | 896228 - 897166 | 34304.6 |
| formate dehydrogenase, gamma subunit | HMPREF0454_00914 | Not Available | + | 897163 - 897795 | 24509.5 |
Pathways
171 pathways
Pyruvate Decarboxylation to Acetyl-CoA
Pyruvate Decarboxylation to Acetyl-CoA
Lipoate Biosynthesis and Incorporation I
Lipoate Biosynthesis and Incorporation I
Pantothenate and CoA Biosynthesis
Pantothenate and CoA Biosynthesis
2-Oxoglutarate Decarboxylation to Succinyl-CoA
2-Oxoglutarate Decarboxylation to Succinyl-CoA
Xylose Degradation I
Xylose Degradation I
Methylphosphonate Degradation I
Methylphosphonate Degradation I
L-Arabinose Degradation I
L-Arabinose Degradation I
Ribose Degradation
Ribose Degradation