Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL09T03C04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1433763 bp
Thymine Count
1416605 bp
Guanine Count
1011813 bp
Cytosine Count
1038238 bp
Genome Length
4900419 bp
Protein-coding Genes
4012 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | HMPREF1058_01908 | Not Available | - | 2338906 - 2339718 | 31077.5 |
| hypothetical protein | HMPREF1058_01909 | Not Available | - | 2339848 - 2340021 | 6738.4 |
| hypothetical protein | HMPREF1058_01910 | Not Available | - | 2340023 - 2340478 | 17667.0 |
| Putative dna n-6-adenine-methyltransferase | HMPREF1058_01911 | Not Available | - | 2340480 - 2340968 | 18526.1 |
| 2_nc_021806: nucleoside triphosphate pyrophosphohydrolase, mazg | HMPREF1058_01912 | Not Available | - | 2340988 - 2341551 | 22355.4 |
| Dna replication protein dnac | HMPREF1058_01913 | Not Available | - | 2341548 - 2342093 | 20924.2 |
| Replisome organizer | HMPREF1058_01914 | Not Available | - | 2342128 - 2342910 | 29968.9 |
| 1_nc_021804: hypothetical protein | HMPREF1058_01915 | Not Available | - | 2342972 - 2343730 | 28417.9 |
| 1_nc_021804: hypothetical protein | HMPREF1058_01916 | Not Available | - | 2343760 - 2344188 | 16549.8 |
| hypothetical protein | HMPREF1058_01917 | Not Available | - | 2344185 - 2344559 | 14557.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

