Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL09T03C04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1433763 bp
Thymine Count
1416605 bp
Guanine Count
1011813 bp
Cytosine Count
1038238 bp
Genome Length
4900419 bp
Protein-coding Genes
4012 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1058_00005 | Not Available | - | 3138 - 3599 | 17146.9 |
| hypothetical protein | HMPREF1058_00006 | Not Available | - | 3590 - 3913 | 12410.6 |
| hypothetical protein | HMPREF1058_00007 | Not Available | - | 3916 - 4233 | 11613.0 |
| 5s ribosomal rna | Not Available | Not Available | + | 4483 - 4592 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 4953 - 5062 | Not Available |
| hypothetical protein | HMPREF1058_00008 | Not Available | - | 4237 - 5541 | 47948.8 |
| hypothetical protein | HMPREF1058_00009 | Not Available | - | 5563 - 5961 | 14699.3 |
| hypothetical protein | HMPREF1058_00010 | Not Available | - | 5986 - 6684 | 26219.2 |
| hypothetical protein | HMPREF1058_00011 | Not Available | - | 7001 - 8035 | 40839.0 |
| txe/yoeb family addiction module toxin | HMPREF1058_00012 | Not Available | + | 8376 - 8567 | 7445.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

