Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL09T03C04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1433763 bp
Thymine Count
1416605 bp
Guanine Count
1011813 bp
Cytosine Count
1038238 bp
Genome Length
4900419 bp
Protein-coding Genes
4012 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Gp34.65 | HMPREF1058_03657 | Not Available | + | 4410921 - 4411634 | 26941.5 |
| 16s ribosomal rna | Not Available | Not Available | + | 1 - 74 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 21 - 1536 | Not Available |
| tape measure domain-containing protein | HMPREF1058_00001 | Not Available | - | 1 - 1134 | 40810.2 |
| 23s ribosomal rna | Not Available | Not Available | + | 1517 - 4402 | Not Available |
| hypothetical protein | HMPREF1058_00002 | Not Available | - | 1260 - 1973 | 27238.9 |
| 23s ribosomal rna | Not Available | Not Available | + | 1987 - 4872 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 2001 - 3516 | Not Available |
| hypothetical protein | HMPREF1058_00003 | Not Available | - | 2055 - 2735 | 24485.7 |
| hypothetical protein | HMPREF1058_00004 | Not Available | - | 2740 - 3141 | 15218.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

