Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL09T03C04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1433763 bp
Thymine Count
1416605 bp
Guanine Count
1011813 bp
Cytosine Count
1038238 bp
Genome Length
4900419 bp
Protein-coding Genes
4012 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1058_03637 | Not Available | - | 4398152 - 4398526 | 14116.0 |
| hypothetical protein | HMPREF1058_03638 | Not Available | - | 4398498 - 4398764 | 10276.2 |
| hypothetical protein | HMPREF1058_03639 | Not Available | + | 4398913 - 4399092 | 6948.21 |
| hypothetical protein | HMPREF1058_03640 | Not Available | + | 4399339 - 4399536 | 7352.05 |
| hypothetical protein | HMPREF1058_03641 | Not Available | + | 4399549 - 4399836 | 10795.8 |
| Hypothetical protein | HMPREF1058_03642 | Not Available | + | 4400152 - 4400604 | 17598.8 |
| hypothetical protein | HMPREF1058_03643 | Not Available | + | 4400668 - 4400811 | 5281.21 |
| Adenine nucleotide alpha hydrolase-like protein | HMPREF1058_03644 | Not Available | + | 4400811 - 4401503 | 27327.1 |
| Parb-like nuclease | HMPREF1058_03645 | Not Available | + | 4401481 - 4402185 | 26582.6 |
| Transposase/terminase small subunit | HMPREF1058_03646 | Not Available | + | 4402188 - 4402682 | 18864.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

