Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL09T03C04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1433763 bp
Thymine Count
1416605 bp
Guanine Count
1011813 bp
Cytosine Count
1038238 bp
Genome Length
4900419 bp
Protein-coding Genes
4012 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1058_01918 | Not Available | - | 2344556 - 2345137 | 21872.3 |
| hypothetical protein | HMPREF1058_01919 | Not Available | - | 2345257 - 2345709 | 17336.7 |
| Hypothetical protein | HMPREF1058_01920 | Not Available | - | 2345699 - 2346064 | 13684.8 |
| Metallohydrolase | HMPREF1058_01921 | Not Available | - | 2346067 - 2346801 | 26831.6 |
| Dna repair protein | HMPREF1058_01922 | Not Available | - | 2346801 - 2347790 | 36503.7 |
| 3_nc_021789: atpase containing protein | HMPREF1058_01923 | Not Available | - | 2347802 - 2349796 | 74934.6 |
| hypothetical protein | HMPREF1058_01924 | Not Available | - | 2349793 - 2350080 | 11062.6 |
| hypothetical protein | HMPREF1058_01925 | Not Available | - | 2350080 - 2350316 | 9031.23 |
| Transcriptional regulator | HMPREF1058_01926 | Not Available | - | 2350335 - 2350886 | 21758.0 |
| Isl3 family transposase | HMPREF1058_03636 | Not Available | + | 4397143 - 4398135 | 38987.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

