Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | HMPREF1064_05070 | Not Available | + | 5894274 - 5895164 | 32706.8 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | HMPREF1064_05071 | Not Available | - | 5895168 - 5895650 | 17461.2 |
| hypothetical protein | HMPREF1064_05072 | Not Available | - | 5895647 - 5896264 | 23327.9 |
| redox-sensing transcriptional repressor rex | HMPREF1064_05073 | Not Available | - | 5896269 - 5896919 | 24309.7 |
| hypothetical protein | HMPREF1064_05074 | Not Available | + | 5897010 - 5897375 | 13825.7 |
| elongation factor ts | HMPREF1064_05075 | Not Available | - | 5897433 - 5898422 | 35518.8 |
| 30s ribosomal protein s2 | HMPREF1064_05076 | Not Available | - | 5898555 - 5899394 | 30564.9 |
| 30s ribosomal protein s9 | HMPREF1064_05077 | Not Available | - | 5899527 - 5899913 | 14527.7 |
| ribosomal protein l13 | HMPREF1064_05078 | Not Available | - | 5899920 - 5900381 | 17129.7 |
| hypothetical protein | HMPREF1064_05079 | Not Available | - | 5900683 - 5900928 | 9071.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
