Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate dehydrogenase | HMPREF1064_05050 | Not Available | - | 5875269 - 5876168 | 32319.0 |
| holliday junction atp-dependent dna helicase ruva | HMPREF1064_05051 | Not Available | + | 5876344 - 5876937 | 21171.8 |
| hypothetical protein | HMPREF1064_05052 | Not Available | - | 5877023 - 5877847 | 30836.0 |
| hypothetical protein | HMPREF1064_05053 | Not Available | + | 5877865 - 5879367 | 57494.8 |
| hemolysin iii family channel protein | HMPREF1064_05054 | Not Available | + | 5879372 - 5880007 | 23692.3 |
| anaerobic ribonucleoside-triphosphate reductase | HMPREF1064_05055 | Not Available | + | 5880302 - 5882578 | 86255.1 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | HMPREF1064_05056 | Not Available | + | 5882584 - 5883042 | 17378.7 |
| rip metalloprotease rsep | HMPREF1064_05057 | Not Available | - | 5883607 - 5884950 | 50879.3 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | HMPREF1064_05058 | Not Available | - | 5885007 - 5886155 | 42384.3 |
| hypothetical protein | HMPREF1064_05059 | Not Available | - | 5886163 - 5887020 | 32093.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
