Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04855 | Not Available | - | 5636394 - 5637929 | 57441.1 |
| 3-isopropylmalate dehydratase, small subunit | HMPREF1064_04856 | Not Available | - | 5637908 - 5638504 | 22389.5 |
| 3-isopropylmalate dehydratase large subunit | HMPREF1064_04857 | Not Available | - | 5638518 - 5639900 | 50113.1 |
| 2-isopropylmalate synthase | HMPREF1064_04858 | Not Available | - | 5639912 - 5641408 | 54450.0 |
| Trna-ala | Not Available | Not Available | + | 5645221 - 5645294 | Not Available |
| Trna-ile | Not Available | Not Available | + | 5645307 - 5645383 | Not Available |
| hypothetical protein | HMPREF1064_04859 | Not Available | - | 5648431 - 5649987 | 60148.7 |
| hypothetical protein | HMPREF1064_04860 | Not Available | - | 5649997 - 5650851 | 32318.8 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1064_04861 | Not Available | - | 5650848 - 5651399 | 22047.7 |
| hypothetical protein | HMPREF1064_04862 | Not Available | - | 5651451 - 5652728 | 49517.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
