Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04294 | Not Available | + | 4873835 - 4875139 | 48264.6 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04295 | Not Available | + | 4875804 - 4879040 | 120067.0 |
| hypothetical protein | HMPREF1064_04296 | Not Available | + | 4879061 - 4881076 | 75955.4 |
| hypothetical protein | HMPREF1064_04297 | Not Available | - | 4881542 - 4883092 | 55165.7 |
| hypothetical protein | HMPREF1064_04298 | Not Available | - | 4883318 - 4885996 | 101350.0 |
| Trna-met | Not Available | Not Available | + | 4886099 - 4886171 | Not Available |
| hypothetical protein | HMPREF1064_04299 | Not Available | + | 4886403 - 4887002 | 22662.3 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | HMPREF1064_04300 | Not Available | + | 4887034 - 4887780 | 25964.4 |
| rlua family pseudouridine synthase | HMPREF1064_04301 | Not Available | + | 4887782 - 4888453 | 25443.7 |
| hypothetical protein | HMPREF1064_04302 | Not Available | - | 4888518 - 4888823 | 10868.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
