Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_00729 | Not Available | + | 804398 - 804661 | 10016.6 |
| hypothetical protein | HMPREF1064_00730 | Not Available | + | 804658 - 805425 | 30575.8 |
| trna pseudouridine synthase a | HMPREF1064_00731 | Not Available | - | 805391 - 806194 | 31005.9 |
| hypothetical protein | HMPREF1064_00732 | Not Available | - | 806199 - 806873 | 24792.2 |
| hypothetical protein | HMPREF1064_00733 | Not Available | + | 807031 - 808035 | 37669.5 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | HMPREF1064_00734 | Not Available | + | 808056 - 809000 | 35902.1 |
| menaquinone biosynthesis methyltransferase ubie | HMPREF1064_00735 | Not Available | + | 809097 - 809834 | 27961.9 |
| shikimate 5-dehydrogenase | HMPREF1064_00736 | Not Available | + | 809853 - 810593 | 27737.7 |
| hypothetical protein | HMPREF1064_00737 | Not Available | + | 810601 - 811551 | 36674.4 |
| hypothetical protein | HMPREF1064_00738 | Not Available | + | 811548 - 812468 | 33426.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
