Phocaeicola dorei CL02T12C06

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola dorei CL02T12C06 is a Gram-negative, nonsporulating rod-shaped bacterium that thrives optimally at 37.0°C and is classified as a chemoheterotroph, utilizing organic compounds for energy. This anaerobic microbe demonstrates a versatile habitat preference, suggesting adaptability to various environments. As a member of the Phocaeicola genus, P. dorei CL02T12C06 contributes to the complex microbial communities in its diverse habitats. Its anaerobic metabolism indicates a potential role in environments where oxygen is limited, such as the gastrointestinal tracts of various organisms or in sediment layers of aquatic ecosystems. The ability to thrive in multiple habitats may reflect its ecological significance, particularly in nutrient cycling and organic matter decomposition. Further studies into the specific roles and interactions of P. dorei CL02T12C06 within its ecosystems could reveal insights into its contributions to microbial diversity and functionality in anaerobic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola dorei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola dorei CL02T12C06
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola dorei CL02T12C06

Accession NumberAGXJ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5172 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nucleoside transporterHMPREF1064_00017Not Available-14918 - 1619546913.4
hypothetical proteinHMPREF1064_00018Not Available-16397 - 1701123012.8
hypothetical proteinHMPREF1064_00019Not Available-17031 - 1759721164.2
sigma-70 family rna polymerase sigma factorHMPREF1064_00020Not Available-17588 - 1805818051.1
hypothetical proteinHMPREF1064_00021Not Available-18244 - 1937742103.5
hypothetical proteinHMPREF1064_00022Not Available-19503 - 2106256881.9
hypothetical proteinHMPREF1064_00023Not Available-21069 - 2302473871.5
sigma-70 family rna polymerase sigma factorHMPREF1064_00024Not Available+23165 - 2371020714.1
hypothetical proteinHMPREF1064_00025Not Available+23707 - 2494547162.9
hypothetical proteinHMPREF1064_00026Not Available+25002 - 2579030948.3

Displaying genes 71 – 80 of 5319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites