Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_00444 | Not Available | - | 470130 - 471296 | 43884.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | HMPREF1064_00445 | Not Available | - | 471313 - 472134 | 29522.8 |
| had hydrolase, family ia | HMPREF1064_00446 | Not Available | - | 472187 - 472837 | 24626.4 |
| mate efflux family protein | HMPREF1064_00447 | Not Available | + | 472927 - 474279 | 49368.6 |
| hypothetical protein | HMPREF1064_00448 | Not Available | + | 474276 - 475724 | 52852.7 |
| metal ion (mn2+/fe2+) transporter (nramp) family metal ion transporter | HMPREF1064_00449 | Not Available | - | 475801 - 477054 | 45673.9 |
| hypothetical protein | HMPREF1064_00450 | Not Available | + | 477157 - 477555 | 15080.7 |
| hypothetical protein | HMPREF1064_00451 | Not Available | - | 477539 - 478642 | 40906.3 |
| hypothetical protein | HMPREF1064_00452 | Not Available | - | 478812 - 479213 | 15397.0 |
| sigma-70 family rna polymerase sigma factor | HMPREF1064_00453 | Not Available | - | 479435 - 480295 | 32805.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
