Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_05030 | Not Available | + | 5848139 - 5849188 | 38570.6 |
| hypothetical protein | HMPREF1064_05031 | Not Available | - | 5849267 - 5850655 | 51181.4 |
| hypothetical protein | HMPREF1064_05032 | Not Available | + | 5850829 - 5851380 | 19927.6 |
| hypothetical protein | HMPREF1064_05033 | Not Available | + | 5851461 - 5852693 | 45919.9 |
| nodt family efflux transporter, outer membrane factor (omf) lipoprotein | HMPREF1064_05034 | Not Available | - | 5852774 - 5854147 | 50236.8 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF1064_05035 | Not Available | - | 5854144 - 5857359 | 117255.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF1064_05036 | Not Available | - | 5857367 - 5858539 | 42518.4 |
| hypothetical protein | HMPREF1064_05037 | Not Available | + | 5858630 - 5859463 | 32279.8 |
| fructose-1,6-bisphosphate aldolase, class ii | HMPREF1064_05038 | Not Available | - | 5859526 - 5860626 | 40228.3 |
| 50s ribosomal protein l31 type b | HMPREF1064_05039 | Not Available | + | 5860857 - 5861111 | 9656.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
