Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate uptake (dcu) family transporter | HMPREF1064_00384 | Not Available | - | 400436 - 401734 | 45850.3 |
| hypothetical protein | HMPREF1064_00385 | Not Available | + | 401917 - 402867 | 34241.4 |
| solute:sodium symporter (sss) family transporter | HMPREF1064_00386 | Not Available | - | 403165 - 404598 | 52131.2 |
| hypothetical protein | HMPREF1064_00387 | Not Available | - | 404612 - 405520 | 33000.2 |
| hypothetical protein | HMPREF1064_00388 | Not Available | - | 405708 - 407156 | 55032.9 |
| diaminopimelate epimerase | HMPREF1064_00389 | Not Available | + | 407567 - 408382 | 29687.8 |
| ll-diaminopimelate aminotransferase | HMPREF1064_00390 | Not Available | + | 408429 - 409658 | 45797.8 |
| hypothetical protein | HMPREF1064_00391 | Not Available | + | 409758 - 410483 | 25982.1 |
| hypothetical protein | HMPREF1064_00392 | Not Available | + | 410575 - 410931 | 13522.4 |
| ammonium transporter | HMPREF1064_00393 | Not Available | + | 411001 - 412398 | 50044.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
