Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | HMPREF1064_04432 | Not Available | + | 5069991 - 5071010 | 37862.2 |
| hypothetical protein | HMPREF1064_04433 | Not Available | + | 5071028 - 5071654 | 23274.0 |
| trna (guanine-n(7)-)-methyltransferase | HMPREF1064_04434 | Not Available | + | 5071776 - 5072534 | 29767.7 |
| hypothetical protein | HMPREF1064_04435 | Not Available | + | 5072545 - 5073645 | 39632.1 |
| tonb family domain-containing protein | HMPREF1064_04436 | Not Available | - | 5073712 - 5075559 | 69405.3 |
| hypothetical protein | HMPREF1064_04437 | Not Available | - | 5075582 - 5075947 | 14105.0 |
| hypothetical protein | HMPREF1064_04438 | Not Available | - | 5076133 - 5076315 | 6854.13 |
| excisionase family dna binding domain-containing protein | HMPREF1064_04439 | Not Available | + | 5076658 - 5077593 | 36228.9 |
| hypothetical protein | HMPREF1064_04440 | Not Available | + | 5077735 - 5078853 | 43474.8 |
| hypothetical protein | HMPREF1064_04441 | Not Available | + | 5079101 - 5079958 | 33369.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
