Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04422 | Not Available | + | 5058000 - 5060306 | 87015.3 |
| hypothetical protein | HMPREF1064_04423 | Not Available | - | 5060325 - 5060912 | 23231.6 |
| hypothetical protein | HMPREF1064_04424 | Not Available | - | 5061033 - 5061959 | 35947.7 |
| hypothetical protein | HMPREF1064_04425 | Not Available | - | 5062103 - 5062507 | 14849.9 |
| hypothetical protein | HMPREF1064_04426 | Not Available | - | 5062662 - 5064518 | 72936.4 |
| hypothetical protein | HMPREF1064_04427 | Not Available | - | 5064750 - 5065379 | 23564.2 |
| mate efflux family protein | HMPREF1064_04428 | Not Available | - | 5065433 - 5066803 | 49543.2 |
| hypothetical protein | HMPREF1064_04429 | Not Available | + | 5066924 - 5068297 | 50001.9 |
| exodeoxyribonuclease vii, large subunit | HMPREF1064_04430 | Not Available | + | 5068297 - 5069604 | 49503.7 |
| hypothetical protein | HMPREF1064_04431 | Not Available | + | 5069613 - 5069816 | 7853.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
