Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | HMPREF1064_04362 | Not Available | - | 4968960 - 4970957 | 74525.1 |
| hypothetical protein | HMPREF1064_04363 | Not Available | - | 4971202 - 4972233 | 39930.6 |
| hypothetical protein | HMPREF1064_04364 | Not Available | - | 4972399 - 4976430 | 154875.0 |
| hypothetical protein | HMPREF1064_04365 | Not Available | - | 4976498 - 4977595 | 42243.5 |
| hypothetical protein | HMPREF1064_04366 | Not Available | - | 4977614 - 4978936 | 49846.2 |
| hypothetical protein | HMPREF1064_04367 | Not Available | - | 4978948 - 4980924 | 74482.9 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | HMPREF1064_04368 | Not Available | - | 4981234 - 4982451 | 46517.6 |
| hypothetical protein | HMPREF1064_04369 | Not Available | + | 4982516 - 4983604 | 41310.5 |
| phenylacetic acid degradation protein paad | HMPREF1064_04370 | Not Available | + | 4983632 - 4984042 | 14999.0 |
| hypothetical protein | HMPREF1064_04371 | Not Available | - | 4984125 - 4984733 | 22178.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
