Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 109 protein 1 | HMPREF1064_04352 | Not Available | - | 4957620 - 4959035 | 53490.0 |
| hypothetical protein | HMPREF1064_04353 | Not Available | - | 4959317 - 4960288 | 37984.6 |
| hypothetical protein | HMPREF1064_04354 | Not Available | + | 4961048 - 4961728 | 25987.5 |
| hypothetical protein | HMPREF1064_04355 | Not Available | + | 4962081 - 4962698 | 22851.5 |
| hypothetical protein | HMPREF1064_04356 | Not Available | + | 4962703 - 4963131 | 16181.7 |
| hypothetical protein | HMPREF1064_04357 | Not Available | - | 4963997 - 4964497 | 19003.3 |
| histidine ammonia-lyase | HMPREF1064_04358 | Not Available | - | 4964615 - 4966111 | 55285.1 |
| hypothetical protein | HMPREF1064_04359 | Not Available | - | 4966146 - 4966769 | 23001.8 |
| imidazolonepropionase | HMPREF1064_04360 | Not Available | - | 4966790 - 4968034 | 44895.3 |
| glutamate formiminotransferase | HMPREF1064_04361 | Not Available | - | 4968049 - 4968951 | 33438.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
