Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidyl-trna synthetase | HMPREF1064_04333 | Not Available | + | 4935645 - 4937009 | 50361.8 |
| crispr-associated helicase cas3 | HMPREF1064_04334 | Not Available | + | 4937342 - 4939567 | 84334.1 |
| hypothetical protein | HMPREF1064_04335 | Not Available | + | 4939578 - 4940438 | 33184.4 |
| crispr-associated protein cas5, subtype i-c/dvulg | HMPREF1064_04336 | Not Available | + | 4940440 - 4941132 | 27246.8 |
| crispr-associated protein cas8c/csd1, subtype i-c/dvulg | HMPREF1064_04337 | Not Available | + | 4941129 - 4942850 | 65343.8 |
| crispr-associated protein cas7/csd2, subtype i-c/dvulg | HMPREF1064_04338 | Not Available | + | 4942872 - 4943723 | 31352.4 |
| crispr-associated protein cas4 | HMPREF1064_04339 | Not Available | + | 4943733 - 4944398 | 25764.9 |
| crispr-associated endonuclease cas1, subtype i-c/dvulg | HMPREF1064_04340 | Not Available | + | 4944395 - 4945417 | 38764.4 |
| crispr-associated endoribonuclease cas2 | HMPREF1064_04341 | Not Available | + | 4945427 - 4945717 | 10982.3 |
| hypothetical protein | HMPREF1064_04342 | Not Available | + | 4945806 - 4945977 | 6472.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
