Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04323 | Not Available | + | 4920909 - 4925231 | 164953.0 |
| hypothetical protein | HMPREF1064_04324 | Not Available | + | 4925396 - 4927000 | 62019.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | HMPREF1064_04325 | Not Available | + | 4927122 - 4927736 | 22170.7 |
| hypothetical protein | HMPREF1064_04326 | Not Available | + | 4927748 - 4928503 | 27350.1 |
| hypothetical protein | HMPREF1064_04327 | Not Available | + | 4928846 - 4929691 | 31441.6 |
| hypothetical protein | HMPREF1064_04328 | Not Available | + | 4929681 - 4930619 | 33640.6 |
| glycerol kinase | HMPREF1064_04329 | Not Available | + | 4930645 - 4932141 | 55247.5 |
| hypothetical protein | HMPREF1064_04330 | Not Available | + | 4932175 - 4933599 | 52354.0 |
| hypothetical protein | HMPREF1064_04331 | Not Available | + | 4933612 - 4934628 | 36111.0 |
| hypothetical protein | HMPREF1064_04332 | Not Available | + | 4934666 - 4935484 | 29982.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
