Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04313 | Not Available | + | 4902562 - 4907220 | 172299.0 |
| hypothetical protein | HMPREF1064_04314 | Not Available | + | 4907232 - 4909574 | 88400.8 |
| hypothetical protein | HMPREF1064_04315 | Not Available | + | 4909709 - 4910620 | 33769.1 |
| hypothetical protein | HMPREF1064_04316 | Not Available | - | 4910725 - 4911627 | 35264.8 |
| hypothetical protein | HMPREF1064_04317 | Not Available | + | 4911839 - 4912519 | 24715.3 |
| hypothetical protein | HMPREF1064_04318 | Not Available | + | 4912679 - 4914061 | 53236.0 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1064_04319 | Not Available | + | 4914064 - 4914666 | 23594.7 |
| hypothetical protein | HMPREF1064_04320 | Not Available | + | 4914731 - 4915717 | 38558.9 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04321 | Not Available | + | 4915746 - 4919015 | 122304.0 |
| hypothetical protein | HMPREF1064_04322 | Not Available | + | 4919035 - 4920732 | 64601.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
