Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04286 | Not Available | - | 4864959 - 4865750 | 29901.7 |
| tryptophan-trna ligase | HMPREF1064_04287 | Not Available | + | 4865854 - 4866948 | 41372.8 |
| Trna-val | Not Available | Not Available | + | 4867162 - 4867236 | Not Available |
| Trna-val | Not Available | Not Available | + | 4867258 - 4867335 | Not Available |
| hypothetical protein | HMPREF1064_04288 | Not Available | + | 4867403 - 4868053 | 24839.4 |
| pp_04289 | HMPREF1064_04289 | Not Available | - | 4868050 - 4869114 | Not Available |
| cysteine synthase a | HMPREF1064_04290 | Not Available | - | 4869124 - 4870071 | 33421.5 |
| hypothetical protein | HMPREF1064_04291 | Not Available | + | 4870217 - 4870729 | 19068.1 |
| hypothetical protein | HMPREF1064_04292 | Not Available | + | 4870777 - 4871154 | 14159.4 |
| hypothetical protein | HMPREF1064_04293 | Not Available | + | 4871177 - 4873633 | 89583.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
