Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04266 | Not Available | - | 4838710 - 4838850 | 5581.07 |
| inosine-5'-monophosphate dehydrogenase | HMPREF1064_04267 | Not Available | + | 4838859 - 4840334 | 52718.0 |
| hypothetical protein | HMPREF1064_04268 | Not Available | + | 4840348 - 4841685 | 51805.4 |
| hypothetical protein | HMPREF1064_04269 | Not Available | + | 4841722 - 4842594 | 34092.5 |
| hypothetical protein | HMPREF1064_04270 | Not Available | + | 4842599 - 4843957 | 52201.7 |
| hypothetical protein | HMPREF1064_04271 | Not Available | + | 4843975 - 4845642 | 63908.4 |
| hypothetical protein | HMPREF1064_04272 | Not Available | + | 4845645 - 4845941 | 11724.6 |
| dna mismatch repair protein mutl | HMPREF1064_04273 | Not Available | + | 4845963 - 4847831 | 68822.0 |
| hypothetical protein | HMPREF1064_04274 | Not Available | + | 4848060 - 4849268 | 45865.1 |
| 3'(2'),5'-bisphosphate nucleotidase | HMPREF1064_04275 | Not Available | + | 4849283 - 4850092 | 30520.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
