Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein era | HMPREF1064_04256 | Not Available | + | 4827174 - 4828055 | 33710.8 |
| gtpase der | HMPREF1064_04257 | Not Available | + | 4828090 - 4829403 | 49402.4 |
| hypothetical protein | HMPREF1064_04258 | Not Available | - | 4829486 - 4830250 | 28957.0 |
| hypothetical protein | HMPREF1064_04259 | Not Available | - | 4830247 - 4831014 | 28393.8 |
| hypothetical protein | HMPREF1064_04260 | Not Available | + | 4831113 - 4831940 | 31322.6 |
| hypothetical protein | HMPREF1064_04261 | Not Available | - | 4832013 - 4832258 | 9049.81 |
| trigger factor | HMPREF1064_04262 | Not Available | + | 4832641 - 4833996 | 51457.6 |
| atp-dependent clp protease proteolytic subunit | HMPREF1064_04263 | Not Available | + | 4834177 - 4834848 | 24894.8 |
| atp-dependent clp protease atp-binding subunit clpx | HMPREF1064_04264 | Not Available | + | 4834973 - 4836223 | 46693.9 |
| atp-dependent dna helicase recq | HMPREF1064_04265 | Not Available | + | 4836381 - 4838561 | 81679.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
