Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04248 | Not Available | + | 4816888 - 4817091 | 7873.46 |
| hypothetical protein | HMPREF1064_04249 | Not Available | - | 4817075 - 4818313 | 47699.0 |
| hypothetical protein | HMPREF1064_04250 | Not Available | - | 4818474 - 4818551 | 3130.84 |
| hypothetical protein | HMPREF1064_04251 | Not Available | - | 4818598 - 4818711 | 4243.18 |
| hypothetical protein | HMPREF1064_04252 | Not Available | + | 4818899 - 4819339 | 16127.8 |
| Trna-ile | Not Available | Not Available | + | 4821462 - 4821538 | Not Available |
| Trna-ala | Not Available | Not Available | + | 4821551 - 4821624 | Not Available |
| hypothetical protein | HMPREF1064_04253 | Not Available | + | 4825243 - 4825785 | 20196.9 |
| 50s ribosomal protein l32 | HMPREF1064_04254 | Not Available | + | 4825797 - 4825982 | 6838.3 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 | HMPREF1064_04255 | Not Available | + | 4826084 - 4827091 | 36993.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
