Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna-protein transferase | HMPREF1064_04230 | Not Available | + | 4799903 - 4800556 | 24879.0 |
| hypothetical protein | HMPREF1064_04231 | Not Available | + | 4800699 - 4801535 | 32224.9 |
| mate efflux family protein | HMPREF1064_04232 | Not Available | + | 4801811 - 4803043 | 46200.9 |
| hypothetical protein | HMPREF1064_04233 | Not Available | + | 4803158 - 4803742 | 22892.4 |
| hypothetical protein | HMPREF1064_04234 | Not Available | - | 4803761 - 4804531 | 29490.6 |
| hypothetical protein | HMPREF1064_04235 | Not Available | - | 4804582 - 4806189 | 60529.6 |
| hypothetical protein | HMPREF1064_04236 | Not Available | + | 4806733 - 4807974 | 48018.2 |
| hypothetical protein | HMPREF1064_04237 | Not Available | + | 4807967 - 4808203 | 9099.1 |
| hypothetical protein | HMPREF1064_04238 | Not Available | + | 4808884 - 4809693 | 32460.2 |
| hypothetical protein | HMPREF1064_04239 | Not Available | + | 4809695 - 4810276 | 23075.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
