Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose isomerase | HMPREF1064_04190 | Not Available | + | 4742556 - 4743809 | 47405.2 |
| hypothetical protein | HMPREF1064_04191 | Not Available | + | 4743903 - 4744922 | 35982.0 |
| rhamnulose-1-phosphate aldolase | HMPREF1064_04192 | Not Available | + | 4744984 - 4745817 | 31201.8 |
| hypothetical protein | HMPREF1064_04193 | Not Available | + | 4746176 - 4746673 | 18505.0 |
| hypothetical protein | HMPREF1064_04194 | Not Available | - | 4746774 - 4748288 | 55807.0 |
| hypothetical protein | HMPREF1064_04195 | Not Available | - | 4748456 - 4750075 | 60061.5 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04196 | Not Available | - | 4750087 - 4753158 | 114381.0 |
| hypothetical protein | HMPREF1064_04197 | Not Available | - | 4753299 - 4757459 | 158151.0 |
| hypothetical protein | HMPREF1064_04198 | Not Available | + | 4757608 - 4758528 | 35152.7 |
| hypothetical protein | HMPREF1064_04199 | Not Available | + | 4758536 - 4759534 | 37373.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
