Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04180 | Not Available | - | 4731000 - 4732526 | 55779.6 |
| hypothetical protein | HMPREF1064_04181 | Not Available | - | 4732562 - 4733944 | 52602.8 |
| hypothetical protein | HMPREF1064_04182 | Not Available | - | 4734124 - 4735020 | 33263.2 |
| pyrroline-5-carboxylate reductase | HMPREF1064_04183 | Not Available | - | 4735292 - 4736065 | 27215.3 |
| hypothetical protein | HMPREF1064_04184 | Not Available | - | 4736250 - 4737374 | 40952.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | HMPREF1064_04185 | Not Available | - | 4737388 - 4738356 | 36000.4 |
| argininosuccinate synthase | HMPREF1064_04186 | Not Available | - | 4738362 - 4739570 | 45126.7 |
| hypothetical protein | HMPREF1064_04187 | Not Available | - | 4739671 - 4740228 | 20628.9 |
| arginine repressor | HMPREF1064_04188 | Not Available | - | 4740252 - 4740728 | 17501.2 |
| rhamnulokinase | HMPREF1064_04189 | Not Available | + | 4741035 - 4742513 | 54852.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
