Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04170 | Not Available | + | 4715593 - 4719003 | 124833.0 |
| hypothetical protein | HMPREF1064_04171 | Not Available | + | 4719031 - 4720917 | 72182.2 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04172 | Not Available | + | 4721340 - 4724468 | 113920.0 |
| hypothetical protein | HMPREF1064_04173 | Not Available | + | 4724490 - 4726460 | 74025.3 |
| hypothetical protein | HMPREF1064_04174 | Not Available | - | 4726772 - 4727236 | 17313.7 |
| hypothetical protein | HMPREF1064_04175 | Not Available | - | 4727281 - 4728933 | 62328.4 |
| hypothetical protein | HMPREF1064_04176 | Not Available | - | 4729018 - 4729572 | 20504.8 |
| hypothetical protein | HMPREF1064_04177 | Not Available | + | 4729819 - 4730310 | 18963.9 |
| hypothetical protein | HMPREF1064_04178 | Not Available | + | 4730286 - 4730393 | 4136.76 |
| hypothetical protein | HMPREF1064_04179 | Not Available | - | 4730571 - 4730987 | 15826.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
