Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04160 | Not Available | + | 4698144 - 4698335 | 7650.37 |
| hypothetical protein | HMPREF1064_04161 | Not Available | - | 4698557 - 4700512 | 73688.4 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04162 | Not Available | - | 4700532 - 4703675 | 114212.0 |
| hypothetical protein | HMPREF1064_04163 | Not Available | - | 4703818 - 4705011 | 45823.4 |
| hypothetical protein | HMPREF1064_04164 | Not Available | - | 4705338 - 4707197 | 70276.5 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04165 | Not Available | - | 4707233 - 4710598 | 123281.0 |
| hypothetical protein | HMPREF1064_04166 | Not Available | - | 4711370 - 4713076 | 63974.9 |
| hypothetical protein | HMPREF1064_04167 | Not Available | - | 4713155 - 4713793 | 24248.7 |
| hypothetical protein | HMPREF1064_04168 | Not Available | + | 4713795 - 4714001 | 7990.83 |
| hypothetical protein | HMPREF1064_04169 | Not Available | + | 4714106 - 4715257 | 45245.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
