Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-alanine-d-alanine ligase | HMPREF1064_04150 | Not Available | + | 4686728 - 4687702 | 36103.2 |
| hypothetical protein | HMPREF1064_04151 | Not Available | + | 4687806 - 4688963 | 44626.7 |
| hypothetical protein | HMPREF1064_04152 | Not Available | + | 4689022 - 4689672 | 24879.7 |
| hypothetical protein | HMPREF1064_04153 | Not Available | + | 4689702 - 4690100 | 15093.2 |
| n-acetylornithine carbamoyltransferase | HMPREF1064_04154 | Not Available | - | 4690486 - 4691451 | 36418.7 |
| gamma-glutamyl phosphate reductase | HMPREF1064_04155 | Not Available | - | 4691471 - 4692724 | 45585.8 |
| glutamate 5-kinase | HMPREF1064_04156 | Not Available | - | 4692762 - 4693844 | 39465.9 |
| cof-like hydrolase | HMPREF1064_04157 | Not Available | + | 4694003 - 4694785 | 28812.6 |
| hypothetical protein | HMPREF1064_04158 | Not Available | + | 4694992 - 4697184 | 82344.2 |
| hypothetical protein | HMPREF1064_04159 | Not Available | + | 4697503 - 4698081 | 21790.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
