Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04140 | Not Available | - | 4676149 - 4678026 | 69261.9 |
| sigma-70 family rna polymerase sigma factor | HMPREF1064_04141 | Not Available | - | 4678253 - 4678774 | 20678.0 |
| hypothetical protein | HMPREF1064_04142 | Not Available | + | 4678889 - 4678981 | 3344.14 |
| hypothetical protein | HMPREF1064_04143 | Not Available | - | 4678945 - 4680852 | 72851.0 |
| hypothetical protein | HMPREF1064_04144 | Not Available | + | 4681484 - 4681723 | 9002.76 |
| hypothetical protein | HMPREF1064_04145 | Not Available | - | 4681907 - 4682350 | 17188.8 |
| hypothetical protein | HMPREF1064_04146 | Not Available | - | 4683117 - 4683374 | 10035.9 |
| hypothetical protein | HMPREF1064_04147 | Not Available | - | 4683502 - 4684848 | 50203.2 |
| hypothetical protein | HMPREF1064_04148 | Not Available | + | 4684998 - 4685639 | 23480.0 |
| rlua family pseudouridine synthase | HMPREF1064_04149 | Not Available | + | 4685658 - 4686731 | 40872.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
