Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04110 | Not Available | + | 4647578 - 4648735 | 44163.6 |
| hypothetical protein | HMPREF1064_04111 | Not Available | + | 4648947 - 4649246 | 11189.8 |
| hsdr family type i site-specific deoxyribonuclease | HMPREF1064_04112 | Not Available | + | 4649270 - 4652095 | 109005.0 |
| hypothetical protein | HMPREF1064_04113 | Not Available | + | 4652098 - 4652757 | 25436.0 |
| hypothetical protein | HMPREF1064_04114 | Not Available | + | 4652764 - 4653519 | 29519.0 |
| type i restriction-modification system, m subunit | HMPREF1064_04115 | Not Available | + | 4653523 - 4655076 | 58670.7 |
| hypothetical protein | HMPREF1064_04116 | Not Available | + | 4655083 - 4657194 | 81863.2 |
| hypothetical protein | HMPREF1064_04117 | Not Available | + | 4657259 - 4658311 | 39950.2 |
| hypothetical protein | HMPREF1064_04118 | Not Available | + | 4658373 - 4659518 | 43147.1 |
| hypothetical protein | HMPREF1064_04119 | Not Available | - | 4659511 - 4659690 | 6998.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
