Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | HMPREF1064_04090 | Not Available | + | 4610427 - 4610582 | 6019.34 |
| anaerobic sulfatase-maturating enzyme | HMPREF1064_04091 | Not Available | - | 4610757 - 4611992 | 48056.5 |
| hypothetical protein | HMPREF1064_04092 | Not Available | - | 4612186 - 4613331 | 42889.4 |
| hypothetical protein | HMPREF1064_04093 | Not Available | - | 4613343 - 4613516 | 6802.47 |
| hypothetical protein | HMPREF1064_04094 | Not Available | - | 4613570 - 4614346 | 29063.5 |
| hypothetical protein | HMPREF1064_04095 | Not Available | - | 4614675 - 4617071 | 90733.5 |
| hypothetical protein | HMPREF1064_04096 | Not Available | - | 4617321 - 4619180 | 69763.0 |
| hypothetical protein | HMPREF1064_04097 | Not Available | - | 4619198 - 4622257 | 116649.0 |
| hypothetical protein | HMPREF1064_04098 | Not Available | - | 4622266 - 4624581 | 87307.8 |
| hypothetical protein | HMPREF1064_04099 | Not Available | - | 4624599 - 4626215 | 63061.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
