Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04060 | Not Available | + | 4569061 - 4570614 | 58367.6 |
| hypothetical protein | HMPREF1064_04061 | Not Available | - | 4570734 - 4571735 | 37760.4 |
| hypothetical protein | HMPREF1064_04062 | Not Available | - | 4572061 - 4573203 | 42595.3 |
| hypothetical protein | HMPREF1064_04063 | Not Available | - | 4573229 - 4575685 | 94019.7 |
| hypothetical protein | HMPREF1064_04064 | Not Available | - | 4575965 - 4577656 | 62940.1 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04065 | Not Available | - | 4577670 - 4580771 | 114602.0 |
| hypothetical protein | HMPREF1064_04066 | Not Available | - | 4581173 - 4583197 | 76829.5 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04067 | Not Available | - | 4583213 - 4586485 | 122268.0 |
| hypothetical protein | HMPREF1064_04068 | Not Available | - | 4586823 - 4587191 | 14025.1 |
| hypothetical protein | HMPREF1064_04069 | Not Available | - | 4587258 - 4587704 | 17530.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
