Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04050 | Not Available | - | 4545407 - 4547755 | 88353.8 |
| hypothetical protein | HMPREF1064_04051 | Not Available | - | 4547772 - 4550270 | 92433.6 |
| hypothetical protein | HMPREF1064_04052 | Not Available | - | 4550298 - 4552241 | 73099.6 |
| hypothetical protein | HMPREF1064_04053 | Not Available | - | 4552494 - 4556012 | 131992.0 |
| hypothetical protein | HMPREF1064_04054 | Not Available | - | 4556139 - 4557611 | 54813.8 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04055 | Not Available | - | 4557633 - 4561019 | 124041.0 |
| hypothetical protein | HMPREF1064_04056 | Not Available | - | 4561170 - 4562114 | 36164.8 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1064_04057 | Not Available | - | 4562188 - 4562748 | 22126.4 |
| hypothetical protein | HMPREF1064_04058 | Not Available | + | 4562952 - 4565462 | 97051.0 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04059 | Not Available | + | 4565977 - 4569048 | 113385.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
