Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04040 | Not Available | - | 4529451 - 4529699 | 9919.87 |
| hypothetical protein | HMPREF1064_04041 | Not Available | - | 4529757 - 4529981 | 8290.01 |
| hypothetical protein | HMPREF1064_04042 | Not Available | - | 4530386 - 4530586 | 7721.75 |
| exonuclease sbcc | HMPREF1064_04043 | Not Available | - | 4530649 - 4533732 | 116656.0 |
| exonuclease sbccd, d subunit | HMPREF1064_04044 | Not Available | - | 4533729 - 4534931 | 45024.0 |
| nuclease sbccd subunit d | HMPREF1064_04045 | Not Available | - | 4534882 - 4535043 | 6234.33 |
| hypothetical protein | HMPREF1064_04046 | Not Available | - | 4535073 - 4537424 | 88937.2 |
| hypothetical protein | HMPREF1064_04047 | Not Available | - | 4537597 - 4539231 | 62429.3 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_04048 | Not Available | - | 4539253 - 4542201 | 108877.0 |
| hypothetical protein | HMPREF1064_04049 | Not Available | - | 4542413 - 4545253 | 107979.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
