Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | HMPREF1064_04030 | Not Available | - | 4519177 - 4521273 | 79842.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | HMPREF1064_04031 | Not Available | - | 4521275 - 4521934 | 24372.5 |
| dj-1 family protein | HMPREF1064_04032 | Not Available | - | 4521931 - 4522482 | 19240.6 |
| tonb family domain-containing protein | HMPREF1064_04033 | Not Available | - | 4522486 - 4523379 | 31654.9 |
| hypothetical protein | HMPREF1064_04034 | Not Available | - | 4523389 - 4523808 | 16051.8 |
| hypothetical protein | HMPREF1064_04035 | Not Available | - | 4523815 - 4524531 | 25772.9 |
| pyridoxine 5'-phosphate synthase | HMPREF1064_04036 | Not Available | - | 4524528 - 4525244 | 26359.6 |
| hypothetical protein | HMPREF1064_04037 | Not Available | + | 4525363 - 4526235 | 32219.5 |
| hypothetical protein | HMPREF1064_04038 | Not Available | + | 4526407 - 4527717 | 49675.4 |
| hypothetical protein | HMPREF1064_04039 | Not Available | - | 4528841 - 4529293 | 17193.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
