Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_04020 | Not Available | + | 4509983 - 4510273 | 10805.2 |
| hypothetical protein | HMPREF1064_04021 | Not Available | + | 4510517 - 4511518 | 36008.4 |
| dna primase | HMPREF1064_04022 | Not Available | + | 4511596 - 4513671 | 78739.4 |
| gtp cyclohydrolase 1 | HMPREF1064_04023 | Not Available | - | 4513687 - 4514280 | 22694.7 |
| hypothetical protein | HMPREF1064_04024 | Not Available | - | 4514285 - 4514743 | 17078.7 |
| triosephosphate isomerase | HMPREF1064_04025 | Not Available | - | 4514849 - 4515604 | 26903.2 |
| hypothetical protein | HMPREF1064_04026 | Not Available | - | 4515635 - 4516879 | 47704.6 |
| hypothetical protein | HMPREF1064_04027 | Not Available | - | 4516926 - 4517468 | 20792.1 |
| hypothetical protein | HMPREF1064_04028 | Not Available | - | 4517582 - 4518469 | 33176.0 |
| nucleoside diphosphate kinase | HMPREF1064_04029 | Not Available | - | 4518491 - 4518955 | 17375.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
