Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-trna hydrolase | HMPREF1064_04004 | Not Available | + | 4480177 - 4480740 | 20603.0 |
| hypothetical protein | HMPREF1064_04005 | Not Available | + | 4480740 - 4481168 | 16409.8 |
| hypothetical protein | HMPREF1064_04006 | Not Available | - | 4481246 - 4481671 | 16357.5 |
| hypothetical protein | HMPREF1064_04007 | Not Available | - | 4481696 - 4483963 | 84387.6 |
| aminomethyltransferase | HMPREF1064_04008 | Not Available | - | 4484170 - 4485255 | 39703.7 |
| peptidase t | HMPREF1064_04009 | Not Available | - | 4485291 - 4486511 | 45213.1 |
| amidophosphoribosyltransferase | HMPREF1064_04010 | Not Available | - | 4486619 - 4488025 | 51939.7 |
| crcb protein | HMPREF1064_04011 | Not Available | + | 4488103 - 4488489 | 14100.6 |
| hypothetical protein | HMPREF1064_04012 | Not Available | - | 4488565 - 4489320 | 28273.2 |
| hypothetical protein | HMPREF1064_04013 | Not Available | + | 4489616 - 4493605 | 152308.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
