Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03994 | Not Available | - | 4471302 - 4471570 | 10213.7 |
| hypothetical protein | HMPREF1064_03995 | Not Available | - | 4471571 - 4471718 | 6081.29 |
| chaperone clpb | HMPREF1064_03996 | Not Available | + | 4472072 - 4474660 | 97152.7 |
| hypothetical protein | HMPREF1064_03997 | Not Available | - | 4475376 - 4475816 | 16049.2 |
| dephospho-coa kinase | HMPREF1064_03998 | Not Available | - | 4475883 - 4476479 | 22344.1 |
| hypothetical protein | HMPREF1064_03999 | Not Available | - | 4476472 - 4477485 | 39066.5 |
| preprotein translocase, yajc subunit | HMPREF1064_04000 | Not Available | - | 4477499 - 4477813 | 11609.3 |
| transcription antitermination factor nusb | HMPREF1064_04001 | Not Available | - | 4477870 - 4478796 | 36291.4 |
| hypothetical protein | HMPREF1064_04002 | Not Available | + | 4478992 - 4479375 | 14786.4 |
| 50s ribosomal protein l25 | HMPREF1064_04003 | Not Available | + | 4479556 - 4480152 | 21443.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
