Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine dehydrogenase | HMPREF1064_03984 | Not Available | + | 4463649 - 4464740 | 39054.9 |
| twin arginine-targeting protein translocase tatc | HMPREF1064_03985 | Not Available | - | 4464826 - 4465656 | 32223.4 |
| tata/e family twin arginine-targeting protein translocase | HMPREF1064_03986 | Not Available | - | 4465663 - 4465866 | 7275.24 |
| hypothetical protein | HMPREF1064_03987 | Not Available | - | 4465911 - 4466018 | 3859.83 |
| hypothetical protein | HMPREF1064_03988 | Not Available | - | 4466015 - 4466524 | 18552.5 |
| hypothetical protein | HMPREF1064_03989 | Not Available | + | 4466658 - 4467140 | 17701.1 |
| hypothetical protein | HMPREF1064_03990 | Not Available | + | 4467219 - 4468508 | 48279.0 |
| hypothetical protein | HMPREF1064_03991 | Not Available | - | 4468559 - 4469545 | 35090.1 |
| hypothetical protein | HMPREF1064_03992 | Not Available | - | 4469634 - 4470530 | 34416.8 |
| hypothetical protein | HMPREF1064_03993 | Not Available | - | 4470543 - 4471124 | 21498.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
