Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03874 | Not Available | - | 4350587 - 4351264 | 25939.4 |
| hypothetical protein | HMPREF1064_03875 | Not Available | - | 4351485 - 4352222 | 27802.8 |
| hypothetical protein | HMPREF1064_03876 | Not Available | + | 4352734 - 4354260 | 56064.4 |
| hypothetical protein | HMPREF1064_03877 | Not Available | - | 4354538 - 4355128 | 22010.2 |
| hydroxylamine reductase | HMPREF1064_03878 | Not Available | + | 4355243 - 4356901 | 61309.9 |
| iron-sulfur cluster repair di-iron protein | HMPREF1064_03879 | Not Available | + | 4356913 - 4357644 | 27814.0 |
| hypothetical protein | HMPREF1064_03880 | Not Available | - | 4357724 - 4360183 | 91927.6 |
| hypothetical protein | HMPREF1064_03881 | Not Available | - | 4360327 - 4364310 | 151608.0 |
| hypothetical protein | HMPREF1064_03882 | Not Available | - | 4364548 - 4364663 | 4581.43 |
| excisionase family dna binding domain-containing protein | HMPREF1064_03883 | Not Available | + | 4364765 - 4365469 | 26196.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
