Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03864 | Not Available | - | 4339429 - 4339842 | 16366.9 |
| atp synthase f1, epsilon subunit | HMPREF1064_03865 | Not Available | - | 4339852 - 4340106 | 9100.84 |
| atp synthase subunit beta | HMPREF1064_03866 | Not Available | - | 4340115 - 4341650 | 56123.4 |
| hypothetical protein | HMPREF1064_03867 | Not Available | - | 4341846 - 4343396 | 57531.3 |
| hypothetical protein | HMPREF1064_03868 | Not Available | - | 4343536 - 4344450 | 34342.0 |
| polyphosphate kinase 1 | HMPREF1064_03869 | Not Available | - | 4344452 - 4346518 | 79791.8 |
| hypothetical protein | HMPREF1064_03870 | Not Available | - | 4346654 - 4347781 | 43480.4 |
| hypothetical protein | HMPREF1064_03871 | Not Available | - | 4347778 - 4348581 | 31166.1 |
| hypothetical protein | HMPREF1064_03872 | Not Available | - | 4348759 - 4349196 | 16897.4 |
| hypothetical protein | HMPREF1064_03873 | Not Available | - | 4349300 - 4350586 | 49765.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
