Phocaeicola dorei CL02T12C06

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola dorei CL02T12C06 is a Gram-negative, nonsporulating rod-shaped bacterium that thrives optimally at 37.0°C and is classified as a chemoheterotroph, utilizing organic compounds for energy. This anaerobic microbe demonstrates a versatile habitat preference, suggesting adaptability to various environments. As a member of the Phocaeicola genus, P. dorei CL02T12C06 contributes to the complex microbial communities in its diverse habitats. Its anaerobic metabolism indicates a potential role in environments where oxygen is limited, such as the gastrointestinal tracts of various organisms or in sediment layers of aquatic ecosystems. The ability to thrive in multiple habitats may reflect its ecological significance, particularly in nutrient cycling and organic matter decomposition. Further studies into the specific roles and interactions of P. dorei CL02T12C06 within its ecosystems could reveal insights into its contributions to microbial diversity and functionality in anaerobic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola dorei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola dorei CL02T12C06
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola dorei CL02T12C06

Accession NumberAGXJ00000000.1

Gene Summary

Adenine Count

1756647 bp

Thymine Count

1710049 bp

Guanine Count

1247135 bp

Cytosine Count

1283480 bp

Genome Length

5997311 bp

Protein-coding Genes

5172 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinHMPREF1064_03854Not Available-4329116 - 433026743264.2
hypothetical proteinHMPREF1064_03855Not Available-4330410 - 433173852132.6
hypothetical proteinHMPREF1064_03856Not Available-4331695 - 433331762385.6
hypothetical proteinHMPREF1064_03857Not Available+4333568 - 433430227922.5
atp synthase gamma chainHMPREF1064_03858Not Available-4334389 - 433525832500.7
atp synthase subunit alphaHMPREF1064_03859Not Available-4335261 - 433685357716.7
atp synthase subunit deltaHMPREF1064_03860Not Available-4336976 - 433753321019.8
atp synthase subunit bHMPREF1064_03861Not Available-4337539 - 433803918885.0
atp synthase subunit cHMPREF1064_03862Not Available-4338050 - 43383048151.6
atp synthase f0, a subunitHMPREF1064_03863Not Available-4338336 - 433942740489.1

Displaying genes 3951 – 3960 of 5319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites