Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03854 | Not Available | - | 4329116 - 4330267 | 43264.2 |
| hypothetical protein | HMPREF1064_03855 | Not Available | - | 4330410 - 4331738 | 52132.6 |
| hypothetical protein | HMPREF1064_03856 | Not Available | - | 4331695 - 4333317 | 62385.6 |
| hypothetical protein | HMPREF1064_03857 | Not Available | + | 4333568 - 4334302 | 27922.5 |
| atp synthase gamma chain | HMPREF1064_03858 | Not Available | - | 4334389 - 4335258 | 32500.7 |
| atp synthase subunit alpha | HMPREF1064_03859 | Not Available | - | 4335261 - 4336853 | 57716.7 |
| atp synthase subunit delta | HMPREF1064_03860 | Not Available | - | 4336976 - 4337533 | 21019.8 |
| atp synthase subunit b | HMPREF1064_03861 | Not Available | - | 4337539 - 4338039 | 18885.0 |
| atp synthase subunit c | HMPREF1064_03862 | Not Available | - | 4338050 - 4338304 | 8151.6 |
| atp synthase f0, a subunit | HMPREF1064_03863 | Not Available | - | 4338336 - 4339427 | 40489.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
