Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03834 | Not Available | + | 4300275 - 4300823 | 20506.6 |
| heavy metal translocating p-type atpase | HMPREF1064_03835 | Not Available | - | 4300911 - 4303130 | 80346.5 |
| hypothetical protein | HMPREF1064_03836 | Not Available | + | 4303303 - 4304151 | 32109.1 |
| ribosomal rna small subunit methyltransferase g | HMPREF1064_03837 | Not Available | + | 4304172 - 4304798 | 23734.0 |
| hypothetical protein | HMPREF1064_03838 | Not Available | + | 4304819 - 4305457 | 23949.5 |
| glycine dehydrogenase | HMPREF1064_03839 | Not Available | + | 4305493 - 4308342 | 105210.0 |
| hypothetical protein | HMPREF1064_03840 | Not Available | - | 4308626 - 4311346 | 103210.0 |
| hypothetical protein | HMPREF1064_03841 | Not Available | - | 4311373 - 4311609 | 9167.97 |
| hypothetical protein | HMPREF1064_03842 | Not Available | + | 4311733 - 4311960 | 8230.71 |
| formate-tetrahydrofolate ligase | HMPREF1064_03843 | Not Available | - | 4311991 - 4313658 | 60530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
